CYC2008 PRP3 = (U4/U6 x U5 tri-snRNP complex) RRP4 = (Cytoplasmic exosome complex::Nuclear exosome complex) YTA12 = (m-AAA complex) NUD1 = (SPB components) MGR1 = (i-AAA complex) RRN9 = (RNA polymerase I upstream activating factor complex) TOM6 = (mitochondrial outer membrane translocase complex) TRS31 = (TRAPP complex) VPS15 = (phosphatidylinositol (PtdIns) 3-kinase complex (functions in CPY sorting)::phosphatidylinositol (PtdIns) 3-kinase complex (functions in autophagy)) CCR4 = (Cdc73p/Paf1p complex::CCR4-NOT core complex) RPS29B = (cytoplasmic ribosomal small subunit) CAF130 = (CCR4-NOT core complex) MSH6 = (MSH2p/MSH6p complex) GPI1 = (glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex) PRP38 = (U4/U6 x U5 tri-snRNP complex) NAM2 = (Bi4p/Nam2p complex) MRPL11 = (mitochondrial ribosomal large subunit) SWH1 = (Swh1p/Nvj1p complex) RSM27 = (mitochondrial ribosomal small subunit) CTF3 = (Ctf3p protein complex) RPS11A = (cytoplasmic ribosomal small subunit) PRE9 = (20S proteasome) SMD1 = (U2 snRNP complex::U5 snRNP complex::U1 snRNP complex::commitment complex::U4/U6 x U5 tri-snRNP complex) VTC1 = (VTC heterotetrameric complex) YSH1 = (mRNA cleavage and polyadenylation specificity factor complex) CLB1 = (Cdc28p/Clb1p complex) SNU114 = (U5 snRNP complex::U4/U6 x U5 tri-snRNP complex) RPL18A = (cytoplasmic ribosomal large subunit) BIR1 = (Sli15p/Bir1p complex) RTT109 = (Rtt109p/Vps75p complex) SDH2 = (Succinate dehydrogenase complex (complex II)) NAT3 = (NatB complex) CTF8 = (DNA replication factor C complex (Ctf18p/Ctf8p/dcc1p)) RFM1 = (Sum1p/Rfm1p/Hst1p complex) TRM8 = (tRNA Methyltransferase Complex) SWC7 = (Swr1p complex) CLB6 = (Cdc28p/Clb6p complex) VTC3 = (VTC heterotetrameric complex) QCR10 = ("Cytochrome bc1 complex (Ubiquinol-cytochrome c reductase complex, complex III)") PAP1 = (mRNA cleavage and polyadenylation specificity factor complex) RPP1B = (cytoplasmic ribosomal large subunit) WHI2 = (Psr1p/Whi2p complex) RPS0A = (cytoplasmic ribosomal small subunit) PRP43 = (Ntr1p/Ntr2p/Prp43p complex) UPF3 = (Nonsense-mediated mRNA decay pathway complex) RPL10 = (cytoplasmic ribosomal large subunit) IKI3 = (Elongator complex) LEA1 = (U2 snRNP complex) SEC26 = (COPI) RPL27B = (cytoplasmic ribosomal large subunit) ORC5 = (Origin recognition complex) SMC6 = (smc5p-Smc6p complex) MRPL7 = (mitochondrial ribosomal large subunit) SWD1 = (COMPASS complex) MRPL15 = (mitochondrial ribosomal large subunit) ATP18 = (F0/F1 ATP synthase (complex V)) SIP1 = (Snf1p/Snf4p/Sip1p complex) MMS4 = (Holliday junction resolvase complex) RNR1 = (ribonucleoside-diphosphate reductase complex) APL2 = (AP-1 adaptor complex) PNG1 = (Png1p/Rad23p complex) MET10 = (sulfite reductase complex (NADPH)) COG1 = (Golgi transport complex) RPS1A = (cytoplasmic ribosomal small subunit) LGE1 = (Lge1p/Bre1p complex) RPS23B = (cytoplasmic ribosomal small subunit) ORC3 = (Origin recognition complex) RSC9 = (RSC complex) DUG3 = (GSH degradosomal complex) GIM3 = (prefoldin complex) RRN10 = (RNA polymerase I upstream activating factor complex) SMC2 = (nuclear condensin complex) RPL5 = (cytoplasmic ribosomal large subunit) UBC13 = (ubiquitin conjugating enzyme complex) SIR3 = (chromatin silencing complex) ZUO1 = (Ribosome-associated complex (RAC)) RPL34A = (cytoplasmic ribosomal large subunit) CTF19 = (COMA complex) MRPL38 = (mitochondrial ribosomal large subunit) CDC28 = (Cdc28p/Cln3p complex::Cdc28p/Clb4p complex::Cdc28p/Clb5p complex::Cdc28p/Clb6p complex::Cdc28p/Cln1p complex::Cdc28p/Clb2p complex::Cdc28p/Clb3p complex::Cdc28p/Clb1p complex::Cdc28p/Cln2p complex) RPL8A = (cytoplasmic ribosomal large subunit) SRP68 = (Signal recognition particle (SRP)) DYN2 = (cytoplasmic dynein complex) RPL37A = (cytoplasmic ribosomal large subunit) OKP1 = (COMA complex) SNF1 = (Snf1p/Snf4p/Sip1p complex::Snf1p/Snf4p/Gal83p complex::Snf1p/Snf4p/Sip2p complex) PDB1 = (mitochondrial pyruvate dehydrogenase complex) GLE1 = (Nup82 nuclear pore subcomplex) RPL40B = (cytoplasmic ribosomal large subunit) VPS54 = (GARP complex) RXT2 = (Rpd3L complex) SEN2 = (tRNA-intron endonuclease complex) RPL8B = (cytoplasmic ribosomal large subunit) MMM1 = (Mdm12p/Mmm1p/Mdm10p complex) SUR1 = (Sur1p/Csg2p complex) ARG3 = (Car1p/Arg3p complex) RPL19B = (cytoplasmic ribosomal large subunit) RPC31 = (DNA-directed RNA polymerase III complex) COX14 = (Cox14p/Cox1p/Mss51p complex) STP22 = (ESCRT I complex) PBP1 = (Mtk1p/Pbp1p complex) SCL1 = (20S proteasome) SRP72 = (Signal recognition particle (SRP)) ECM29 = (19/22S regulator) SNX41 = (Atg20p/Snx4p/Snx41p complex) SEC39 = (Dsl1p complex) REG1 = (Reg1p/Glc7p complex) PKP1 = (mitochondrial pyruvate dehydrogenase complex) COX3 = (Cytochrome c oxidase (complex IV)) MKT1 = (Mtk1p/Pbp1p complex) SWI1 = (SWI/SNF complex) RPS24A = (cytoplasmic ribosomal small subunit) LSM2 = (U6 snRNP complex::U4/U6 x U5 tri-snRNP complex) ILV6 = (acetolactate synthase complex) VPS64 = (Far3p/Far7p/Far8p/Far9p/Far10p/Far11p complex) MRPL6 = (mitochondrial ribosomal large subunit) GCD11 = (multi-eIF complex::eIF2) RGP1 = (guanyl-nucleotide exchange factor complex) VID30 = (FBP degradation complex) MET4 = (Cbf1p/Met4p/Met28p complex::Met4p/Met28p/Met32p complex::Met4p/Met28p/Met31p complex) SWI6 = (MBF complex::SBF complex) PMS1 = (Mlh1p/Pms1p complex) VMA22 = (ER V-ATPase assembly complex) CLN1 = (Cdc28p/Cln1p complex) HPR1 = (Cdc73p/Paf1p complex::THO complex) POL1 = (alpha DNA polymerase:primase complex) RPS27B = (cytoplasmic ribosomal small subunit) RPP1 = (nucleolar ribonuclease P complex::ribonuclease MRP complex) YDL176W = (FBP degradation complex) NAM7 = (Nonsense-mediated mRNA decay pathway complex) APC9 = (anaphase-promoting complex) GAL83 = (Snf1p/Snf4p/Gal83p complex) HAP3 = (CCAAT-binding factor complex) RPN9 = (19/22S regulator) OST6 = (oligosaccharyl transferase complex) END3 = ("actin cytoskeleton-regulatory complex, Pan1p/Sla1p/End3p complex") COX9 = (Cytochrome c oxidase (complex IV)) SWS2 = (mitochondrial ribosomal small subunit) PTC5 = (mitochondrial pyruvate dehydrogenase complex) CSH1 = (Csh1p/Csg2p complex) TIF35 = (eIF3) RPL25 = (cytoplasmic ribosomal large subunit) COG6 = (Golgi transport complex) EXO70 = (Exocyst complex) SBH2 = (Ssh1p translocon complex) SMB1 = (U2 snRNP complex::U5 snRNP complex::U1 snRNP complex::commitment complex::U4/U6 x U5 tri-snRNP complex) MCM2 = (Mcm2-7 complex) MRP1 = (mitochondrial ribosomal small subunit) RSC58 = (RSC complex) CLB4 = (Cdc28p/Clb4p complex) MRPL31 = (mitochondrial ribosomal large subunit) YAF9 = (NuA4 histone acetyltransferase complex::Swr1p complex) TIM23 = (mitochondrial inner membrane presequence translocase complex) TUB4 = (gamma-tubulin complex) ROT2 = (Rot2p/Gtb1p complex) TAF11 = (transcription factor TFIID complex) THP1 = (Sac3p/Thp1p complex) LEO1 = (Cdc73p/Paf1p complex) PHB1 = (prohibitin complex) TIM11 = (F0/F1 ATP synthase (complex V)) RPS19A = (cytoplasmic ribosomal small subunit) SLX1 = (Slx1p/Slx4p complex) PCL8 = (Pho85p/Pcl8p complex) UGO1 = (Mgm1p/Ugo1p/Fzo1p complex) RGR1 = (Kornberg's mediator (SRB) complex) MAS2 = (mitochondrial processing peptidase complex) RPL42B = (cytoplasmic ribosomal large subunit) VMA6 = ("H+-transporting ATPase, vacuolar"::"H+-transporting ATPase, Golgi") TRM11 = (adoMet-dependent tRNA methyltransferase (Mtase) Complex) NSP1 = (Nsp1p complex::Nsp1p/Nup82p complex) ARP4 = (NuA4 histone acetyltransferase complex::Ino80p complex::Swr1p complex) SAR1 = (COPII) AIR2 = (TRAMP complex (Air2p)) POP7 = (nucleolar ribonuclease P complex::ribonuclease MRP complex) HRP1 = (mRNA cleavage factor complex (CFI)) CPA2 = (carbamoyl-phosphate synthase complex) TIM8 = (Tim8p/Tim13p complex) CTK1 = (carboxy-terminal domain protein kinase complex) GCR2 = (GCR complex) PCC1 = (EKC/KEOPS protein complex) MNN9 = ("alpha-1,6-mannosyltransferase complex(Anp1p/Mnn9p)"::"alpha-1,6-mannosyltransferase complex(Van1p/Mnn9p)") RPL6B = (cytoplasmic ribosomal large subunit) SSZ1 = (Ribosome-associated complex (RAC)) MFT1 = (THO complex) YOS9 = (ubiquitin ligase ERAD-L complex::luminal surveillance complex) RPS14B = (cytoplasmic ribosomal small subunit) NUP53 = (karyopherin docking subcomplex of the Nuclear Pore Complex (NPC)) CHZ1 = (Chz1p/Htz1p/Htb1p complex) CHS5 = (Chs5p/Arf-1binding proteins (ChAPs)) BDP1 = (transcription factor TFIIIB complex) NSE5 = (smc5p-Smc6p complex) SPC110 = (SPB components) YME1 = (i-AAA complex) RSC3 = (RSC complex) CCL1 = (transcription factor TFIIH complex) MRPL40 = (mitochondrial ribosomal large subunit) HRD1 = (ubiquitin ligase ERAD-L complex::ubiquitin ligase ERAD-M complex) VMA4 = ("H+-transporting ATPase, vacuolar"::"H+-transporting ATPase, Golgi") TUB2 = (Tubulins) CFT1 = (mRNA cleavage and polyadenylation specificity factor complex) IMP2 = (mitochondrial inner membrane peptidase complex) ISD11 = (Nfs1p/Isd11p complex) PAM16 = (PAM complex::mitochondrial inner membrane presequence translocase complex) SNF7 = (ESCRT III complex) HTZ1 = (Chz1p/Htz1p/Htb1p complex) NCB2 = (NC2 complex) MUD1 = (U1 snRNP complex::commitment complex) RPS25B = (cytoplasmic ribosomal small subunit) RTG1 = (Rtg1p/Rtg3p complex) NSE3 = (smc5p-Smc6p complex) RPS1B = (cytoplasmic ribosomal small subunit) DPB11 = (Dpb11p/Sld2p complex) ACT1 = (NuA4 histone acetyltransferase complex::Ino80p complex::Swr1p complex) PPA1 = ("H+-transporting ATPase, vacuolar"::"H+-transporting ATPase, Golgi") TEF2 = (eEF1) YML6 = (mitochondrial ribosomal large subunit) IDH1 = (Isocitrate dehydrogenase) RPN1 = (19/22S regulator) SPT14 = (glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex) VMA7 = ("H+-transporting ATPase, vacuolar"::"H+-transporting ATPase, Golgi") RPS22A = (cytoplasmic ribosomal small subunit) RTT103 = (RNA Degradation Complex) EAF3 = (NuA4 histone acetyltransferase complex::Rpd3S complex) TAF10 = (SAGA complex::SLIK (SAGA-like) complex::transcription factor TFIID complex) OST3 = (oligosaccharyl transferase complex) VMA10 = ("H+-transporting ATPase, vacuolar"::"H+-transporting ATPase, Golgi") SPC1 = (signal peptidase complex) RPS17A = (cytoplasmic ribosomal small subunit) GPI15 = (glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex) ARP9 = (SWI/SNF complex::RSC complex) NIP100 = (dynactin complex) DNL4 = (DNA ligase IV) MED11 = (Kornberg's mediator (SRB) complex) RPT3 = (19/22S regulator) PRP6 = (U4/U6 x U5 tri-snRNP complex) GPI16 = (GPI-anchor transamidase complex) RRP6 = (Nuclear exosome complex) SNU56 = (U1 snRNP complex::commitment complex) RPB8 = (DNA-directed RNA polymerase III complex::DNA-directed RNA polymerase I complex::DNA-directed RNA polymerase II complex) SPC24 = (Ndc80p complex) RPL15A = (cytoplasmic ribosomal large subunit) IKI1 = (Elongator complex) ATP20 = (F0/F1 ATP synthase (complex V)) CDC34 = (SCF-CDC4 complex) SOM1 = (mitochondrial inner membrane peptidase complex) FAR1 = (Cdc24p/Far1p/Gbetagamma protein complex) NUF2 = (Ndc80p complex) HST1 = (Sum1p/Rfm1p/Hst1p complex::Set3p complex) FIG4 = (Fig4p/Vac14p complex) MUD2 = (commitment complex) SPT3 = (SAGA complex::SLIK (SAGA-like) complex) TOM5 = (mitochondrial outer membrane translocase complex) NNF1 = (MIND complex) PEX2 = (RING finger peroxin complex) DBF4 = (Cdc7p/Dbf4p complex) DPB3 = (DNA polymerase epsilon complex) RSM7 = (mitochondrial ribosomal small subunit) PRP24 = (U6 snRNP complex) UBA2 = (Uba2p/Aos1p complex) PRP9 = (U2 snRNP complex::Prp9p/Prp11p/Prp21p complex(SF3a complex)) ASC1 = (cytoplasmic ribosomal small subunit) PAF1 = (Cdc73p/Paf1p complex) CSE2 = (Kornberg's mediator (SRB) complex) RAD2 = (nucleotide-excision repair factor 3 complex) VPS35 = (retromer complex) SRB5 = (Kornberg's mediator (SRB) complex) RAD18 = (Rad6p/Rad18p complex) SEC61 = (Sec61p translocon complex) AAR2 = (U5 snRNP complex) SDC1 = (COMPASS complex) REG2 = (Reg2p/Glc7p complex) URB2 = (Npa2p-containing subcomplex) RNA15 = (mRNA cleavage factor complex (CFI)) RPL40A = (cytoplasmic ribosomal large subunit) RAD23 = (nucleotide-excision repair factor 2 complex::Png1p/Rad23p complex) ANP1 = ("alpha-1,6-mannosyltransferase complex(Anp1p/Mnn9p)") PRP4 = (U4/U6 x U5 tri-snRNP complex) MRPS16 = (mitochondrial ribosomal small subunit) TAF7 = (transcription factor TFIID complex) RPL35B = (cytoplasmic ribosomal large subunit) RPS28A = (cytoplasmic ribosomal small subunit) HHT1 = (Nucleosomal protein complex::RNA polymerase I upstream activating factor complex) HDA3 = (histone deacetylase complex) RNR4 = (ribonucleoside-diphosphate reductase complex) RPL31B = (cytoplasmic ribosomal large subunit) SEC24 = (COPII) TPD3 = (protein phosphatase type 2A complex (Cdc55p)::protein phosphatase type 2A complex (Rts1p)) GAL4 = (GAL4p/GAL80p complex) CYC8 = (Tup1p/Ssn6p complex::Sko1p/Cyc8p/Tup1 repressor complex) PRP28 = (U5 snRNP complex) CDC55 = (protein phosphatase type 2A complex (Cdc55p)) MMS2 = (ubiquitin conjugating enzyme complex) SNF4 = (Snf1p/Snf4p/Sip1p complex::Snf1p/Snf4p/Gal83p complex::Snf1p/Snf4p/Sip2p complex) VPH1 = ("H+-transporting ATPase, vacuolar") DPB2 = (DNA polymerase epsilon complex) DSL1 = (Dsl1p complex) UBP8 = (SAGA complex::SLIK (SAGA-like) complex) MRE11 = (MRX complex) BET2 = (Geranylgeranyltransferase II (GGTase II)) RRP45 = (Cytoplasmic exosome complex::Nuclear exosome complex) NUP85 = (Nup84p complex) POL32 = (DNA polymerase delta complex) KOG1 = (TORC 1 complex) MAD1 = (Mad1p/Mad2p complex) MRPL36 = (mitochondrial ribosomal large subunit) DEP1 = (Rpd3L complex) ATP19 = (F0/F1 ATP synthase (complex V)) CDC20 = (anaphase-promoting complex::mitotic checkpoint complex) SSA3 = (HMC Complex) MRPL44 = (mitochondrial ribosomal large subunit) TAF3 = (transcription factor TFIID complex) EAF6 = (NuA4 histone acetyltransferase complex::NuA3 histone acetyltransferase complex) COX13 = (Cytochrome c oxidase (complex IV)) SAP30 = (Rpd3L complex) MRPS8 = (mitochondrial ribosomal small subunit) TFC1 = (transcription factor TFIIIC complex) FTR1 = (Permease-Oxidase Complex) ATG16 = (Apg12p/Apg5p/Apg16 multimeric complex) CDH1 = (anaphase-promoting complex) GCV1 = (glycine cleavage complex) MRPL17 = (mitochondrial ribosomal large subunit) RPL19A = (cytoplasmic ribosomal large subunit) QCR9 = ("Cytochrome bc1 complex (Ubiquinol-cytochrome c reductase complex, complex III)") MOB1 = (Mob1p/Dbf2p complex) KIC1 = (Hym1p/Kic1p/Sog2p complex) APL4 = (AP-1 adaptor complex) UME1 = (Rpd3L complex::Rpd3S complex) CDC14 = (RENT complex) PUP2 = (20S proteasome) MCM3 = (Mcm2-7 complex) UTP10 = (UTP A complex) STE18 = (heterodimeric G-protein complex::heterotrimeric G-protein complex::Cdc24p/Far1p/Gbetagamma protein complex) ORC1 = (Origin recognition complex) GCN5 = (SAGA complex::SLIK (SAGA-like) complex::Ada2p/Gcn5p/Ada3 transcription activator complex) ATG14 = (phosphatidylinositol (PtdIns) 3-kinase complex (functions in autophagy)) UTP21 = (UTP B complex) RET3 = (COPI) SWC3 = (Swr1p complex) APL1 = (AP-2 adaptor complex) SSC1 = (PAM complex) SSL2 = (nucleotide-excision repair factor 3 complex::transcription factor TFIIH complex) CCT2 = (chaperonin-containing T-complex) RAD50 = (MRX complex) SPP1 = (COMPASS complex) SEC5 = (Exocyst complex) TRS23 = (TRAPP complex) DIS3 = (Cytoplasmic exosome complex::Nuclear exosome complex) RPS25A = (cytoplasmic ribosomal small subunit) CDC53 = (SCF-CDC4 complex::nuclear ubiquitin ligase complex) COG7 = (Golgi transport complex) SLM1 = (TORC 2 complex) RFA1 = (DNA replication factor A complex) HOS2 = (Set3p complex) RED1 = (Synaptonemal complex (SC)) ERV41 = (Erv41p/Erv46p complex) TRM82 = (tRNA Methyltransferase Complex) MDM10 = (Mdm12p/Mmm1p/Mdm10p complex::mitochondrial sorting and assembly machinery complex) TAF6 = (SAGA complex::SLIK (SAGA-like) complex::transcription factor TFIID complex) MRS11 = (mitochondrial intermembrane space protein transporter complex) TPS3 = ("alpha,alpha-trehalose-phosphate synthase complex (UDP-forming)") RPS8A = (cytoplasmic ribosomal small subunit) MNN10 = ("alpha-1,6-mannosyltransferase complex(Anp1p/Mnn9p)") RAD16 = (Cul3p-RING ubiquitin ligase complex::nucleotide-excision repair factor 4 complex) TPS1 = ("alpha,alpha-trehalose-phosphate synthase complex (UDP-forming)") SHQ1 = (Shq1p/Naf1p complex) PPH21 = (protein phosphatase type 2A complex (Cdc55p)::protein phosphatase type 2A complex (Rts1p)::Tap42p/Pph21p/Rrd2p complex) CSN12 = (signalosome complex) CTF18 = (DNA replication factor C complex (Ctf18p/Ctf8p/dcc1p)) SEM1 = (19/22S regulator) GYP5 = (Gyl1p/Gyp5p complex) SUI2 = (multi-eIF complex::eIF2) SEN34 = (tRNA-intron endonuclease complex) GCN1 = (Gcn1p/Gcn20p complex) PEX17 = (peroxin docking complex) MEC3 = (Rad17p/Ddc1p/Mec3p complex) RAT1 = (RNA Degradation Complex) CBC2 = (commitment complex) TID3 = (Ndc80p complex) TIF11 = (eIF1/eIF1A/40S complex) TIM13 = (Tim8p/Tim13p complex) POB3 = (FACT complex) TEX1 = (transcription export complex) LSM7 = (U6 snRNP complex::U4/U6 x U5 tri-snRNP complex) VMA2 = ("H+-transporting ATPase, vacuolar"::"H+-transporting ATPase, Golgi") CCS1 = (Sod1p/Ccs1p complex) UBA3 = (Ula1p/Uba3p complex) ZIP1 = (Synaptonemal complex (SC)) POL31 = (DNA polymerase delta complex) SRB7 = (Kornberg's mediator (SRB) complex) MTW1 = (MIND complex) MRP13 = (mitochondrial ribosomal small subunit) DIG1 = (Dig1p/Ste12p/Dig2p complex) DCC1 = (DNA replication factor C complex (Ctf18p/Ctf8p/dcc1p)) INH1 = (mitochondrial ATPase inhibitor complex::F0/F1 ATP synthase (complex V)) TFC8 = (transcription factor TFIIIC complex) DYN1 = (cytoplasmic dynein complex) STE20 = (Cdc42p/Ste20p complex) BRE5 = (Ubp3p/Bre5p complex) LIF1 = (DNA ligase IV) RPL11B = (cytoplasmic ribosomal large subunit) MAK3 = (NatC complex) RPS28B = (cytoplasmic ribosomal small subunit) TAF8 = (transcription factor TFIID complex) GET3 = (GET complex) NFS1 = (Nfs1p/Isd11p complex) POP2 = (CCR4-NOT core complex) AME1 = (COMA complex) HTA1 = (Nucleosomal protein complex) GET2 = (GET complex) PIL1 = (Eisosome) POL3 = (DNA polymerase delta complex) HRR25 = (monopolin complex) VPS72 = (Swr1p complex) HOS4 = (Set3p complex) PRE10 = (20S proteasome) BUL2 = (Rsp5p/Bul2 ubiquitin ligase complex) RRI1 = (signalosome complex) DUG2 = (GSH degradosomal complex) SRP21 = (Signal recognition particle (SRP)) TAF4 = (transcription factor TFIID complex) SGF11 = (SAGA complex) BUB1 = (Bub1p/Bub3p complex) RPL4B = (cytoplasmic ribosomal large subunit) VPS52 = (GARP complex) BUR2 = (Sgv1p/Bur2p complex) TFG1 = (transcription factor TFIIF complex) PCF11 = (mRNA cleavage factor complex (CFI)) ARC18 = (Arp2/3 protein complex) PXA1 = (Pxa1p/Pxa2p complex) RPO21 = (DNA-directed RNA polymerase II complex) TPK2 = (cAMP-dependent protein kinase) CTK3 = (carboxy-terminal domain protein kinase complex) RPL24B = (cytoplasmic ribosomal large subunit) PRT1 = (eIF3::multi-eIF complex) SIR4 = (chromatin silencing complex) CAM1 = (eEF1) PSF1 = (GINS complex) FYV10 = (FBP degradation complex) BRE1 = (Lge1p/Bre1p complex) MSL5 = (commitment complex) VAM7 = (Vam3p/Vam7 vacuolar tSNARE complex) SGV1 = (Sgv1p/Bur2p complex) SPC3 = (signal peptidase complex) RNH201 = (ribonuclease H2 complex) CLF1 = (Prp19-associated complex) PEA2 = (polarisome complex) ULA1 = (Ula1p/Uba3p complex) SKI8 = (Ski Complex) SNO1 = (Sno1p/Snz1p complex) CTF13 = (CBF3 complex) SPT15 = (transcription factor TFIIIB complex::Mot1p complex::transcription factor TFIID complex) SAP155 = (Sap155p/Sit4p complex) MVB12 = (ESCRT I complex) PET309 = (Cbp1p/Pet309p complex) VPS16 = (CORVET complex::HOPS complex) HSH49 = (U2 snRNP complex::SF3b complex) CDC42 = (Cdc42p/Ste20p complex) ELP3 = (Elongator complex) HFI1 = (SAGA complex::SLIK (SAGA-like) complex::Ada2p/Gcn5p/Ada3 transcription activator complex) NET1 = (RENT complex) HSE1 = (Hse1p/Vps27p complex) SEC21 = (COPI) VAR1 = (mitochondrial ribosomal small subunit) CFT2 = (mRNA cleavage and polyadenylation specificity factor complex) PWP2 = (UTP B complex) TIM22 = (mitochondrial inner membrane protein insertion complex) NUP170 = (karyopherin docking subcomplex of the Nuclear Pore Complex (NPC)) ELC1 = (Cul3p-RING ubiquitin ligase complex::nucleotide-excision repair factor 4 complex::Ela1p/Elc1p complex) GPI19 = (glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex) PAC11 = (cytoplasmic dynein complex) DAD2 = (DASH complex) NPL4 = (Cdc48p complex) DAD1 = (DASH complex) SEC16 = (COPII) UTP15 = (UTP A complex) RPS19B = (cytoplasmic ribosomal small subunit) LSP1 = (Eisosome) MRPL16 = (mitochondrial ribosomal large subunit) ISY1 = (Prp19-associated complex) CAF40 = (CCR4-NOT core complex) DYN3 = (cytoplasmic dynein complex) CLN2 = (Cdc28p/Cln2p complex) GPI17 = (GPI-anchor transamidase complex) LCB1 = (serine C-palmitoyltransferase complex) SCC4 = (cohesin loading factor complex) RPL18B = (cytoplasmic ribosomal large subunit) BCY1 = (cAMP-dependent protein kinase) SNZ1 = (Sno1p/Snz1p complex) LSM5 = (U6 snRNP complex::U4/U6 x U5 tri-snRNP complex) SRN2 = (ESCRT I complex) MRP4 = (mitochondrial ribosomal small subunit) SEC66 = (Sec62p/Sec63p complex) PCL1 = (Pho85p/Pcl1p complex) APL3 = (AP-2 adaptor complex) VAN1 = ("alpha-1,6-mannosyltransferase complex(Van1p/Mnn9p)") ERP1 = (COPII) PRI2 = (alpha DNA polymerase:primase complex) ORC4 = (Origin recognition complex) TOM20 = (mitochondrial outer membrane translocase complex) MAM1 = (monopolin complex) RPL33A = (cytoplasmic ribosomal large subunit) GCD2 = (eIF2B) CCZ1 = (Mon1p/Ccz1p complex) CLB5 = (Cdc28p/Clb5p complex) SLD5 = (GINS complex) ALG13 = (UDP-N-acetylglucosamine transferase complex) LSM3 = (U6 snRNP complex::U4/U6 x U5 tri-snRNP complex) SEN54 = (tRNA-intron endonuclease complex) RPT6 = (19/22S regulator) MKS1 = (Mks1p/Rtg2p complex) BBP1 = (Mps2p/Bbp1p complex) TRS130 = (TRAPP complex) RPL29 = (cytoplasmic ribosomal large subunit) DUG1 = (GSH degradosomal complex) MRPS28 = (mitochondrial ribosomal small subunit) PRE3 = (20S proteasome) MRS1 = (Bi3 ribonucleoprotein complex) TAF13 = (transcription factor TFIID complex) CKA1 = (UTP C complex::protein kinase CK2 complex) ARG81 = (ARGR complex) OST1 = (oligosaccharyl transferase complex) IPI3 = (Rix1p complex) ILV2 = (acetolactate synthase complex) NPL6 = (RSC complex) APM3 = (AP-3 adaptor complex) CDC43 = (CAAX-protein geranylgeranyltransferase complex) SEC11 = (signal peptidase complex) MRPL39 = (mitochondrial ribosomal large subunit) GCV2 = (glycine cleavage complex) KIN28 = (transcription factor TFIIH complex) PAP2 = (TRAMP complex (Air1p)::TRAMP complex (Air2p)) SSN3 = (Kornberg's mediator (SRB) complex) SMC3 = (nuclear cohesin complex) POL12 = (alpha DNA polymerase:primase complex) MAK21 = (Noc1p/Noc2p complex) SWD3 = (COMPASS complex) SNX4 = (Atg20p/Snx4p/Snx41p complex) HSC82 = (HMC Complex) PFS2 = (mRNA cleavage and polyadenylation specificity factor complex) CNA1 = (calcineurin complex) SNF5 = (SWI/SNF complex) KRE29 = (smc5p-Smc6p complex) SIW14 = (OCA complex) TIF1 = (eIF4F) PEX14 = (peroxin docking complex) RPA34 = (DNA-directed RNA polymerase I complex) TOM7 = (mitochondrial outer membrane translocase complex) RPL14B = (cytoplasmic ribosomal large subunit) HHT2 = (Nucleosomal protein complex) MDM12 = (Mdm12p/Mmm1p/Mdm10p complex) HHF2 = (Nucleosomal protein complex) KAR2 = (luminal surveillance complex) APS1 = (AP-1 adaptor complex) MRPL19 = (mitochondrial ribosomal large subunit) LRS4 = (monopolin complex::Csm1p/Lrs4p complex) PRP19 = (Prp19-associated complex) LAT1 = (mitochondrial pyruvate dehydrogenase complex) FAR3 = (Far3p/Far7p/Far8p/Far9p/Far10p/Far11p complex) MRPS17 = (mitochondrial ribosomal small subunit) RPS8B = (cytoplasmic ribosomal small subunit) RAD10 = (nucleotide-excision repair factor 1 complex) SUS1 = (SAGA complex) CTK2 = (carboxy-terminal domain protein kinase complex) MND2 = (anaphase-promoting complex) GIM5 = (prefoldin complex) CBF2 = (CBF3 complex) HPC2 = (HIR complex) RSA3 = (Npa2p-containing subcomplex) TFP1 = ("H+-transporting ATPase, vacuolar"::"H+-transporting ATPase, Golgi") PPE1 = (mitochondrial ribosomal small subunit) RPS21A = (cytoplasmic ribosomal small subunit) NUT1 = (Kornberg's mediator (SRB) complex) RXT3 = (Rpd3L complex) FZO1 = (Mgm1p/Ugo1p/Fzo1p complex) NOT3 = (CCR4-NOT core complex) SWR1 = (Swr1p complex) VPS17 = (retromer complex) UTP13 = (UTP B complex) CYR1 = (adenylyl cyclase complex) SSH1 = (Ssh1p translocon complex) MRPL27 = (mitochondrial ribosomal large subunit) RPL31A = (cytoplasmic ribosomal large subunit) DPB4 = (chromatin accessibility complex::DNA polymerase epsilon complex) MST28 = (Mst27p/Mst28p complex) SHR5 = (palmitoyltransferase complex) INO80 = (Ino80p complex) VAM6 = (HOPS complex) CCT8 = (chaperonin-containing T-complex) IFH1 = (CURI complex) IDH2 = (Isocitrate dehydrogenase) RPL41A = (cytoplasmic ribosomal large subunit) OAF1 = (OAF complex) ATG12 = (Apg12p/Apg5p/Apg16 multimeric complex) FRS1 = (Phenylalaninine-tRNA-ligase) IPL1 = (Aurora B-INCENP protein kinase complex) DIG2 = (Dig1p/Ste12p/Dig2p complex) LPD1 = (glycine cleavage complex::mitochondrial oxoglutarate dehydrogenase complex::mitochondrial pyruvate dehydrogenase complex) NMD2 = (Nonsense-mediated mRNA decay pathway complex) ARP2 = (Arp2/3 protein complex) IMP1 = (mitochondrial inner membrane peptidase complex) ARG2 = ("Arg2p/Arg5,6p complex") BET4 = (Geranylgeranyltransferase II (GGTase II)) INO2 = (Ino2p/Ino4p basic helix-loop-helix heteromeric complex) MAD2 = (mitotic checkpoint complex::Mad1p/Mad2p complex) NSE4 = (smc5p-Smc6p complex) RPL22A = (cytoplasmic ribosomal large subunit) PSF2 = (GINS complex) SRV2 = (adenylyl cyclase complex) GAL80 = (GAL4p/GAL80p complex::GAL3p/GAL80p complex) PRE6 = (20S proteasome) SPO7 = (Nem1p/Spo7p complex) EST3 = (Telomerase) YRA1 = (transcription export complex) SFH1 = (RSC complex) MRPL24 = (mitochondrial ribosomal large subunit) SSN8 = (Kornberg's mediator (SRB) complex) RRD1 = (Tap42p/Sit4p/Rrd1p complex) ASF1 = (Rad53p/Asf1p complex) SAM50 = (mitochondrial sorting and assembly machinery complex) RPP2A = (cytoplasmic ribosomal large subunit) GSC2 = ("1,3-beta-glucan synthase complex (Gsc2p/Smk1p)") MRPL4 = (mitochondrial ribosomal large subunit) ERV25 = (COPII) RPP2B = (cytoplasmic ribosomal large subunit) GYL1 = (Gyl1p/Gyp5p complex) RPS3 = (cytoplasmic ribosomal small subunit) THO2 = (THO complex) TIM21 = (mitochondrial inner membrane presequence translocase complex) AVO1 = (TORC 2 complex) OCA6 = (OCA complex) CSM3 = (Tof1p/Mrc1p/Csm3p complex) PRE8 = (20S proteasome) CMD1 = (SPB components) PMT3 = (Protein O-mannosyltransferase(Pmt3p/Pmt5p)) NOC3 = (Noc2p/Noc3p complex) PHO80 = (Pho85p/Pho80p complex) RPB4 = (DNA-directed RNA polymerase II complex) SPT5 = (DSIF complex) RPL13B = (cytoplasmic ribosomal large subunit) RPL26B = (cytoplasmic ribosomal large subunit) RNH202 = (ribonuclease H2 complex) MDM20 = (NatB complex) LSC2 = (Succinyl-CoA ligase) RPS16A = (cytoplasmic ribosomal small subunit) SNU13 = (box C/D snoRNP complex::U4/U6 x U5 tri-snRNP complex) SPC72 = (SPB components) RPL14A = (cytoplasmic ribosomal large subunit) ARG80 = (ARGR complex) HDA1 = (histone deacetylase complex) RPL9A = (cytoplasmic ribosomal large subunit) GCD7 = (eIF2B) SNF12 = (SWI/SNF complex) RPS5 = (cytoplasmic ribosomal small subunit) CTI6 = (Rpd3L complex) MRPL1 = (mitochondrial ribosomal large subunit) COX7 = (Cytochrome c oxidase (complex IV)) ERP2 = (COPII) YDR115W = (mitochondrial ribosomal large subunit) BRE2 = (COMPASS complex) EPL1 = (NuA4 histone acetyltransferase complex) RPB10 = (DNA-directed RNA polymerase III complex::DNA-directed RNA polymerase I complex::DNA-directed RNA polymerase II complex) BRF1 = (transcription factor TFIIIB complex) RPN10 = (19/22S regulator) MGM1 = (Mgm1p/Ugo1p/Fzo1p complex) PML1 = (RES complex) SEC72 = (Sec62p/Sec63p complex) GRR1 = (nuclear ubiquitin ligase complex) ELP4 = (Elongator complex) LCB2 = (serine C-palmitoyltransferase complex) MRPL50 = (mitochondrial ribosomal large subunit) TCO89 = (TORC 1 complex) MNN11 = ("alpha-1,6-mannosyltransferase complex(Anp1p/Mnn9p)") IOC4 = (ISW1b complex) LRP1 = (Nuclear exosome complex) TIF34 = (eIF3::multi-eIF complex) RPA49 = (DNA-directed RNA polymerase I complex) SSL1 = (nucleotide-excision repair factor 3 complex::transcription factor TFIIH complex) RFA2 = (DNA replication factor A complex) RRI2 = (signalosome complex) RPB11 = (DNA-directed RNA polymerase II complex) APC4 = (anaphase-promoting complex) POP6 = (nucleolar ribonuclease P complex::ribonuclease MRP complex) CUP5 = ("H+-transporting ATPase, vacuolar"::"H+-transporting ATPase, Golgi") SIN3 = (Rpd3L complex::Rpd3S complex) RPS4B = (cytoplasmic ribosomal small subunit) TIP20 = (Dsl1p complex) ATP2 = (F0/F1 ATP synthase (complex V)) GON7 = (EKC/KEOPS protein complex) ARC1 = (methionyl glutamyl tRNA synthetase complex) CCT7 = (chaperonin-containing T-complex) MCM1 = (ARGR complex) FRS2 = (Phenylalaninine-tRNA-ligase) STE4 = (heterodimeric G-protein complex::heterotrimeric G-protein complex::Cdc24p/Far1p/Gbetagamma protein complex) SAS5 = (SAS Complex) YKU80 = (Ku complex) RPL36A = (cytoplasmic ribosomal large subunit) RPA135 = (DNA-directed RNA polymerase I complex) RPS13 = (cytoplasmic ribosomal small subunit) TIM17 = (mitochondrial inner membrane presequence translocase complex) ORC2 = (Origin recognition complex) PAM18 = (PAM complex::mitochondrial inner membrane presequence translocase complex) ATP14 = (F0/F1 ATP synthase (complex V)) GAC1 = (Gac1p/Glc7p complex) VMA5 = ("H+-transporting ATPase, vacuolar"::"H+-transporting ATPase, Golgi") FIP1 = (mRNA cleavage and polyadenylation specificity factor complex) RPS22B = (cytoplasmic ribosomal small subunit) SUP35 = (translation release factor complex) REC102 = (meiotic recombination initiation complex) ARG82 = (ARGR complex) RPL28 = (cytoplasmic ribosomal large subunit) COG3 = (Golgi transport complex) MCM4 = (Mcm2-7 complex) DID4 = (ESCRT III complex) RSC6 = (RSC complex) VPS75 = (Rtt109p/Vps75p complex) MRPS18 = (mitochondrial ribosomal small subunit) USE1 = (Dsl1p complex) SEC62 = (Sec62p/Sec63p complex) MRP17 = (mitochondrial ribosomal small subunit) IME1 = (Ume6p/Ime1p complex) RPL23A = (cytoplasmic ribosomal large subunit) QCR6 = ("Cytochrome bc1 complex (Ubiquinol-cytochrome c reductase complex, complex III)") SNM1 = (ribonuclease MRP complex) RAD6 = (Rad6p/Rad18p complex) RAD17 = (Rad17p/Ddc1p/Mec3p complex) VPS8 = (CORVET complex) NSE1 = (smc5p-Smc6p complex) TOM22 = (mitochondrial outer membrane translocase complex) RPN5 = (19/22S regulator) RAD7 = (Cul3p-RING ubiquitin ligase complex::nucleotide-excision repair factor 4 complex) RPS12 = (cytoplasmic ribosomal small subunit) SUI1 = (multi-eIF complex::eIF1/eIF1A/40S complex) MRP2 = (mitochondrial ribosomal small subunit) COX2 = (Cytochrome c oxidase (complex IV)) GAL3 = (GAL3p/GAL80p complex) CEF1 = (Prp19-associated complex) MEH1 = (GSE Complex::EGO complex) RSM24 = (mitochondrial ribosomal small subunit) NOP14 = (Noc4p/Nop14p complex) RHO1 = ("1,3-beta-glucan synthase complex (Fks1p/Rho1p)") SNF8 = (ESCRT II complex) DCS1 = (Dcs1p/Dcs2 heterodimer) EFB1 = (eEF1) RSC4 = (RSC complex) VPS24 = (ESCRT III complex) APM1 = (AP-1 adaptor complex) RIP1 = ("Cytochrome bc1 complex (Ubiquinol-cytochrome c reductase complex, complex III)") MRPL20 = (mitochondrial ribosomal large subunit) SPC97 = (gamma-tubulin complex) BFA1 = (Bub2p/Bfa1p complex) SYC1 = (mRNA cleavage and polyadenylation specificity factor complex) TEF4 = (eEF1) SWP1 = (oligosaccharyl transferase complex) SEH1 = (Nup84p complex) YCS4 = (nuclear condensin complex) HAT1 = (HAT-B complex) RFC1 = (DNA replication factor C complex (Rcf1p)) MON2 = (Dop1p/Mon2p complex) SPC42 = (SPB components) SGF29 = (SAGA complex) CDC27 = (anaphase-promoting complex) DCS2 = (Dcs1p/Dcs2 heterodimer) RPS31 = (cytoplasmic ribosomal small subunit) MRPL13 = (mitochondrial ribosomal large subunit) PDX1 = (mitochondrial pyruvate dehydrogenase complex) PIP2 = (OAF complex) RPL38 = (cytoplasmic ribosomal large subunit) ATG5 = (Apg12p/Apg5p/Apg16 multimeric complex) PSY2 = (histone H2A phosphatase complex) NGG1 = (SAGA complex::SLIK (SAGA-like) complex::Ada2p/Gcn5p/Ada3 transcription activator complex) SEC8 = (Exocyst complex) SMC5 = (smc5p-Smc6p complex) RPL39 = (cytoplasmic ribosomal large subunit) NUT2 = (Kornberg's mediator (SRB) complex) SGS1 = (RecQ helicase-Topo III complex) RSC8 = (RSC complex) CMP2 = (calcineurin complex) PAN2 = (PAN complex) SMK1 = ("1,3-beta-glucan synthase complex (Gsc2p/Smk1p)") EXO84 = (Exocyst complex) RFC3 = (DNA replication factor C complex (Ctf18p/Ctf8p/dcc1p)::DNA replication factor C complex (Rad24p)::DNA replication factor C complex (Elg1p)::DNA replication factor C complex (Rcf1p)) RPS6A = (cytoplasmic ribosomal small subunit) MUS81 = (Holliday junction resolvase complex) RPL16B = (cytoplasmic ribosomal large subunit) GTR1 = (GSE Complex) MRPL25 = (mitochondrial ribosomal large subunit) NUP159 = (Nup82 nuclear pore subcomplex) TPK3 = (cAMP-dependent protein kinase) CDC26 = (anaphase-promoting complex) CCT4 = (chaperonin-containing T-complex) PRP42 = (U1 snRNP complex::commitment complex) MST27 = (Mst27p/Mst28p complex) CSN9 = (signalosome complex) ELP2 = (Elongator complex) SDH4 = (Succinate dehydrogenase complex (complex II)) MCM5 = (Mcm2-7 complex) VID24 = (FBP degradation complex) NUP145 = (Nup84p complex) EAF7 = (NuA4 histone acetyltransferase complex) MRP49 = (mitochondrial ribosomal large subunit) CKB2 = (UTP C complex::protein kinase CK2 complex::CURI complex) SIF2 = (Set3p complex) SPC2 = (signal peptidase complex) NAM9 = (mitochondrial ribosomal small subunit) TFC3 = (transcription factor TFIIIC complex) MED4 = (Kornberg's mediator (SRB) complex) YHC1 = (U1 snRNP complex::commitment complex) PFK1 = (6-phosphofructokinase complex) HIR2 = (HIR complex) STE11 = (STE5-MAPK complex) APS2 = (AP-2 adaptor complex) PAC10 = (prefoldin complex) UFE1 = (Dsl1p complex) SMD2 = (U2 snRNP complex::U5 snRNP complex::U1 snRNP complex::commitment complex::U4/U6 x U5 tri-snRNP complex) UBP3 = (Ubp3p/Bre5p complex) TFB4 = (nucleotide-excision repair factor 3 complex::transcription factor TFIIH complex) RPL41B = (cytoplasmic ribosomal large subunit) RVS167 = (Rvs161p/Rvs167p complex) COP1 = (COPI) RLF2 = (chromatin assembly complex) SKI6 = (Cytoplasmic exosome complex::Nuclear exosome complex) RPS17B = (cytoplasmic ribosomal small subunit) RPL1A = (cytoplasmic ribosomal large subunit) RPP1A = (cytoplasmic ribosomal large subunit) MRPL22 = (mitochondrial ribosomal large subunit) VPS51 = (GARP complex) RPL21B = (cytoplasmic ribosomal large subunit) CYT1 = ("Cytochrome bc1 complex (Ubiquinol-cytochrome c reductase complex, complex III)") RAD57 = (other DNA repair complexes) RPC82 = (DNA-directed RNA polymerase III complex) RPS24B = (cytoplasmic ribosomal small subunit) BUR6 = (NC2 complex) ATP6 = (F0/F1 ATP synthase (complex V)) MPE1 = (mRNA cleavage and polyadenylation specificity factor complex) SAS4 = (SAS Complex) ATP8 = (F0/F1 ATP synthase (complex V)) MAS1 = (mitochondrial processing peptidase complex) CDC7 = (Cdc7p/Dbf4p complex) CLN3 = (Cdc28p/Cln3p complex) TOA2 = (transcription factor TFIIA complex) SRB2 = (Kornberg's mediator (SRB) complex) ISW1 = (ISW1b complex::ISW1a complex) SEC6 = (Exocyst complex) TRS120 = (TRAPP complex) RAI1 = (RNA Degradation Complex) APL6 = (AP-3 adaptor complex) YDJ1 = (HMC Complex) TOP3 = (RecQ helicase-Topo III complex) GUS1 = (methionyl glutamyl tRNA synthetase complex) HDA2 = (histone deacetylase complex) DIP2 = (UTP B complex) UTP6 = (UTP B complex) ZIP2 = (Synaptonemal complex (SC)) RSM18 = (mitochondrial ribosomal small subunit) RPL3 = (cytoplasmic ribosomal large subunit) MCM7 = (Mcm2-7 complex) DLS1 = (chromatin accessibility complex) ADA2 = (SAGA complex::SLIK (SAGA-like) complex::Ada2p/Gcn5p/Ada3 transcription activator complex) SEC9 = (SNARE complex::Sro1p/Sec4p/Sec9p complex) RPS6B = (cytoplasmic ribosomal small subunit) RPS27A = (cytoplasmic ribosomal small subunit) RPT4 = (19/22S regulator) NUP120 = (Nup84p complex) RRD2 = (Tap42p/Pph21p/Rrd2p complex) RPN12 = (19/22S regulator) YNG1 = (NuA3 histone acetyltransferase complex) IRR1 = (nuclear cohesin complex) SUP45 = (translation release factor complex) RSM22 = (mitochondrial ribosomal small subunit) RAD53 = (Rad53p/Asf1p complex) NAF1 = (Shq1p/Naf1p complex) SCC2 = (cohesin loading factor complex) DAD4 = (DASH complex) EST1 = (Telomerase) SRP102 = (signal recognition particle receptor complex) SDS22 = (Sds22p/Glc7p complex) GCD10 = (Gcd10p/Gcd14p complex) TFA2 = (transcription factor TFIIE complex) SPA2 = (polarisome complex) RPC40 = (DNA-directed RNA polymerase III complex::DNA-directed RNA polymerase I complex) STF2 = (mitochondrial ATPase inhibitor complex) MSH2 = (MSH2p/MSH3p complex::MSH2p/MSH6p complex) STF1 = (mitochondrial ATPase inhibitor complex) ALG14 = (UDP-N-acetylglucosamine transferase complex) HOP2 = (Hop2p/Mnd1p complex) NTR2 = (Ntr1p/Ntr2p/Prp43p complex) NOP1 = (box C/D snoRNP complex) SYF2 = (Prp19-associated complex) SNU66 = (U4/U6 x U5 tri-snRNP complex) RFC2 = (DNA replication factor C complex (Ctf18p/Ctf8p/dcc1p)::DNA replication factor C complex (Rad24p)::DNA replication factor C complex (Elg1p)::DNA replication factor C complex (Rcf1p)) HIF1 = (HAT-B complex) APC1 = (anaphase-promoting complex) RRP40 = (Cytoplasmic exosome complex::Nuclear exosome complex) VPS5 = (retromer complex) COX1 = (Cox14p/Cox1p/Mss51p complex::Cytochrome c oxidase (complex IV)) RET2 = (COPI) CDC39 = (CCR4-NOT core complex) RPL9B = (cytoplasmic ribosomal large subunit) SSN2 = (Kornberg's mediator (SRB) complex) MES1 = (methionyl glutamyl tRNA synthetase complex) SLX5 = (Slx5p/Slx8p complex) RPB7 = (DNA-directed RNA polymerase II complex) SNF11 = (SWI/SNF complex) SUB2 = (transcription export complex) OCA4 = (OCA complex) PAM17 = (PAM complex) GCV3 = (glycine cleavage complex) REC8 = (nuclear cohesin complex) CPR1 = (Set3p complex) SEC10 = (Exocyst complex) TOR1 = (TORC 1 complex) SEC20 = (Dsl1p complex) JNM1 = (dynactin complex) UTP18 = (UTP B complex) NOP8 = (Npa2p-containing subcomplex) RPL24A = (cytoplasmic ribosomal large subunit) TCP1 = (chaperonin-containing T-complex) PTI1 = (mRNA cleavage and polyadenylation specificity factor complex) MRP20 = (mitochondrial ribosomal large subunit) PTA1 = (mRNA cleavage and polyadenylation specificity factor complex) RPS16B = (cytoplasmic ribosomal small subunit) PDS1 = (Esp1p/Pds1p complex) RTF1 = (Cdc73p/Paf1p complex) VPH2 = (ER V-ATPase assembly complex) ATP5 = (F0/F1 ATP synthase (complex V)) VPS3 = (CORVET complex) ERV46 = (Erv41p/Erv46p complex::COPII) BUD32 = (EKC/KEOPS protein complex) RPB3 = (DNA-directed RNA polymerase II complex) RPL13A = (cytoplasmic ribosomal large subunit) TOM70 = (mitochondrial outer membrane translocase complex) VAM3 = (Vam3p/Vam7 vacuolar tSNARE complex) RPL30 = (cytoplasmic ribosomal large subunit) ARP3 = (Arp2/3 protein complex) RPC37 = (DNA-directed RNA polymerase III complex) GCN3 = (eIF2B) PRE4 = (20S proteasome) FTH1 = (Fth1p/Fet5p complex) NAT5 = (NatA complex) MTR3 = (Cytoplasmic exosome complex::Nuclear exosome complex) SRP54 = (Signal recognition particle (SRP)) CDC24 = (Cdc24p/Far1p/Gbetagamma protein complex) MSH3 = (MSH2p/MSH3p complex) CCT5 = (chaperonin-containing T-complex) SEC63 = (Sec62p/Sec63p complex) ARC15 = (Arp2/3 protein complex) TIM44 = (PAM complex) COQ3 = (Q-biosynthetic Coq polypeptide complex) VPS25 = (ESCRT II complex) HTL1 = (RSC complex) SAM37 = (mitochondrial sorting and assembly machinery complex) SPP382 = (Ntr1p/Ntr2p/Prp43p complex) RSM26 = (mitochondrial ribosomal small subunit) RPR2 = (nucleolar ribonuclease P complex) ATP3 = (F0/F1 ATP synthase (complex V)) PSF3 = (GINS complex) TUB1 = (Tubulins) PRE7 = (20S proteasome) BET3 = (TRAPP complex) CTR9 = (Cdc73p/Paf1p complex) RPS30A = (cytoplasmic ribosomal small subunit) MET28 = (Cbf1p/Met4p/Met28p complex::Met4p/Met28p/Met32p complex::Met4p/Met28p/Met31p complex) OST2 = (oligosaccharyl transferase complex) SWI4 = (SBF complex) IMG1 = (mitochondrial ribosomal large subunit) SLM4 = (GSE Complex::EGO complex) SPT20 = (SAGA complex::SLIK (SAGA-like) complex) SEC3 = (Exocyst complex) RPS20 = (cytoplasmic ribosomal small subunit) RPS9B = (cytoplasmic ribosomal small subunit) CLB2 = (Cdc28p/Clb2p complex) SOD1 = (Sod1p/Ccs1p complex) NAM8 = (U1 snRNP complex::commitment complex) LUC7 = (U1 snRNP complex::commitment complex) NIP1 = (eIF3::multi-eIF complex) IOC2 = (ISW1b complex) RPC53 = (DNA-directed RNA polymerase III complex) SPT8 = (SAGA complex) LSM4 = (U6 snRNP complex::U4/U6 x U5 tri-snRNP complex) HTB2 = (Nucleosomal protein complex) HTA2 = (Nucleosomal protein complex) ASM4 = (karyopherin docking subcomplex of the Nuclear Pore Complex (NPC)) RPG1 = (eIF3) RPA14 = (DNA-directed RNA polymerase I complex) APS3 = (AP-3 adaptor complex) MAK10 = (NatC complex) TRS20 = (TRAPP complex) TEF1 = (eEF1) APC2 = (anaphase-promoting complex) NEM1 = (Nem1p/Spo7p complex) AHC1 = (Ada2p/Gcn5p/Ada3 transcription activator complex) MRPL8 = (mitochondrial ribosomal large subunit) SRB6 = (Kornberg's mediator (SRB) complex) RPN13 = (19/22S regulator) TIF5 = (multi-eIF complex) NTC20 = (Prp19-associated complex) STE12 = (Dig1p/Ste12p/Dig2p complex) LDB7 = (RSC complex) FAR11 = (Far3p/Far7p/Far8p/Far9p/Far10p/Far11p complex) GCR1 = (GCR complex) CKA2 = (UTP C complex::protein kinase CK2 complex) SLX8 = (Slx5p/Slx8p complex) CAR1 = (Car1p/Arg3p complex) CNB1 = (calcineurin complex) COR1 = ("Cytochrome bc1 complex (Ubiquinol-cytochrome c reductase complex, complex III)") DER1 = (ubiquitin ligase ERAD-L complex) DIB1 = (U5 snRNP complex::U4/U6 x U5 tri-snRNP complex) IPI1 = (Rix1p complex) SPC98 = (gamma-tubulin complex) GPI2 = (glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex) MRC1 = (Tof1p/Mrc1p/Csm3p complex) DCP1 = (Decapping Enzyme Complex) IES3 = (Ino80p complex) VMA8 = ("H+-transporting ATPase, vacuolar"::"H+-transporting ATPase, Golgi") GPI8 = (GPI-anchor transamidase complex) RFC4 = (DNA replication factor C complex (Ctf18p/Ctf8p/dcc1p)::DNA replication factor C complex (Rad24p)::DNA replication factor C complex (Elg1p)::DNA replication factor C complex (Rcf1p)) RNA14 = (mRNA cleavage factor complex (CFI)) MRPS5 = (mitochondrial ribosomal small subunit) QCR2 = ("Cytochrome bc1 complex (Ubiquinol-cytochrome c reductase complex, complex III)") RPL23B = (cytoplasmic ribosomal large subunit) KEL2 = (Kel1p/Kel2p complex::Kel1p/Kel2p/Lte1p complex) SAC3 = (Sac3p/Thp1p complex) FAR10 = (Far3p/Far7p/Far8p/Far9p/Far10p/Far11p complex) IES1 = (Ino80p complex) SLA1 = ("actin cytoskeleton-regulatory complex, Pan1p/Sla1p/End3p complex") VPS38 = (phosphatidylinositol (PtdIns) 3-kinase complex (functions in CPY sorting)) ATP4 = (F0/F1 ATP synthase (complex V)) PUP3 = (20S proteasome) APM2 = (AP-1 adaptor complex) RML2 = (mitochondrial ribosomal large subunit) GPA1 = (heterotrimeric G-protein complex) SAM35 = (mitochondrial sorting and assembly machinery complex) PSY4 = (histone H2A phosphatase complex) ABF1 = (nucleotide-excision repair factor 4 complex) DSN1 = (MIND complex) GRH1 = (Grh1p/Bug1p complex) NUP82 = (Nup82 nuclear pore subcomplex::Nsp1p/Nup82p complex) CLU1 = (eIF3) NIC96 = (Nsp1p complex) RPS7B = (cytoplasmic ribosomal small subunit) ATP7 = (F0/F1 ATP synthase (complex V)) BUB3 = (Bub1p/Bub3p complex::mitotic checkpoint complex) MCM22 = (Ctf3p protein complex) SIP2 = (Snf1p/Snf4p/Sip2p complex) SIN4 = (Kornberg's mediator (SRB) complex) RTG3 = (Rtg1p/Rtg3p complex) HIR1 = (HIR complex) GCD14 = (Gcd10p/Gcd14p complex) MRPL35 = (mitochondrial ribosomal large subunit) APC5 = (anaphase-promoting complex) NUP84 = (Nup84p complex) BUD7 = (Chs5p/Arf-1binding proteins (ChAPs)) MBP1 = (MBF complex) POP4 = (nucleolar ribonuclease P complex::ribonuclease MRP complex) HAT2 = (HAT-B complex) CLB3 = (Cdc28p/Clb3p complex) RPL4A = (cytoplasmic ribosomal large subunit) SHG1 = (COMPASS complex) SMC1 = (nuclear cohesin complex) PRP8 = (U5 snRNP complex::U4/U6 x U5 tri-snRNP complex) ITC1 = (chromatin accessibility complex) TSC11 = (TORC 2 complex) APL5 = (AP-3 adaptor complex) BUB2 = (Bub2p/Bfa1p complex) CHC1 = (Clathrin) PRE1 = (20S proteasome) RRN7 = (RNA polymerase I transcription factor complex) RPC10 = (DNA-directed RNA polymerase III complex::DNA-directed RNA polymerase I complex::DNA-directed RNA polymerase II complex) VTC2 = (VTC heterotetrameric complex) UFD1 = (Cdc48p complex) ECM17 = (sulfite reductase complex (NADPH)) SWD2 = (COMPASS complex::mRNA cleavage and polyadenylation specificity factor complex) STV1 = ("H+-transporting ATPase, Golgi") PCL10 = (Pho85p/Pcl10p complex) RET1 = (DNA-directed RNA polymerase III complex) RPL12A = (cytoplasmic ribosomal large subunit) DDC1 = (Rad17p/Ddc1p/Mec3p complex) PFD1 = (prefoldin complex) CDC23 = (anaphase-promoting complex) RPL17B = (cytoplasmic ribosomal large subunit) ARC35 = (Arp2/3 protein complex) NOC2 = (Noc1p/Noc2p complex::Noc2p/Noc3p complex) UTP4 = (UTP A complex) RNR2 = (ribonucleoside-diphosphate reductase complex) RPL43A = (cytoplasmic ribosomal large subunit) SEC4 = (Sro1p/Sec4p/Sec9p complex) RDS3 = (SF3b complex) TRP2 = (anthranilate synthase complex) SPT16 = (FACT complex) RAM2 = (CAAX-protein geranylgeranyltransferase complex::protein farnesyltransferase complex) RPL1B = (cytoplasmic ribosomal large subunit) RPL22B = (cytoplasmic ribosomal large subunit) MOB2 = (Mob2p/Cbk1p complex) POL5 = (UTP A complex) RPS0B = (cytoplasmic ribosomal small subunit) TAF2 = (transcription factor TFIID complex) MRP51 = (mitochondrial ribosomal small subunit) COG2 = (Golgi transport complex) THP2 = (THO complex) TIM18 = (mitochondrial inner membrane protein insertion complex) RPN7 = (19/22S regulator) NUP49 = (Nsp1p complex) YNG2 = (NuA4 histone acetyltransferase complex) RPL20A = (cytoplasmic ribosomal large subunit) LSC1 = (Succinyl-CoA ligase) NAS6 = (19/22S regulator) PBI2 = (LMA1 complex) DBP6 = (Npa2p-containing subcomplex) NOP58 = (box C/D snoRNP complex) SWI3 = (SWI/SNF complex) ESA1 = (NuA4 histone acetyltransferase complex) UAF30 = (RNA polymerase I upstream activating factor complex) RSM19 = (mitochondrial ribosomal small subunit) DUO1 = (DASH complex) SEC27 = (COPI) CSG2 = (Sur1p/Csg2p complex::Csh1p/Csg2p complex) YCG1 = (nuclear condensin complex) RPL2A = (cytoplasmic ribosomal large subunit) SEN15 = (tRNA-intron endonuclease complex) ELG1 = (DNA replication factor C complex (Elg1p)) SRB8 = (Kornberg's mediator (SRB) complex) STE7 = (STE5-MAPK complex) PHB2 = (prohibitin complex) MCM16 = (Ctf3p protein complex) ARP8 = (Ino80p complex) UTP22 = (UTP C complex::CURI complex) BUD13 = (RES complex) RPS30B = (cytoplasmic ribosomal small subunit) RAD4 = (nucleotide-excision repair factor 2 complex) CUS1 = (U2 snRNP complex::SF3b complex) RPS9A = (cytoplasmic ribosomal small subunit) EAF5 = (NuA4 histone acetyltransferase complex) VPS53 = (GARP complex) MOT1 = (Mot1p complex) CDC4 = (SCF-CDC4 complex) MMS21 = (smc5p-Smc6p complex) FET3 = (Permease-Oxidase Complex) ATP17 = (F0/F1 ATP synthase (complex V)) RPS10A = (cytoplasmic ribosomal small subunit) GLO3 = (COPI) MRP21 = (mitochondrial ribosomal small subunit) SKP1 = (CBF3 complex::nuclear ubiquitin ligase complex::SCF-CDC4 complex::RAVE complex) RPL7B = (cytoplasmic ribosomal large subunit) SAS3 = (NuA3 histone acetyltransferase complex) PEX10 = (RING finger peroxin complex) VPS71 = (Swr1p complex) LSM6 = (U6 snRNP complex::U4/U6 x U5 tri-snRNP complex) ARP1 = (dynactin complex) SKI2 = (Ski Complex) CSM1 = (monopolin complex::Csm1p/Lrs4p complex) HTB1 = (Chz1p/Htz1p/Htb1p complex::Nucleosomal protein complex) RFA3 = (DNA replication factor A complex) OLI1 = (F0/F1 ATP synthase (complex V)) MRPL33 = (mitochondrial ribosomal large subunit) RPL37B = (cytoplasmic ribosomal large subunit) SOG2 = (Hym1p/Kic1p/Sog2p complex) EMP24 = (COPII) DSS1 = (degradosome) SWC4 = (NuA4 histone acetyltransferase complex::Swr1p complex) RAD55 = (other DNA repair complexes) DBF2 = (Mob1p/Dbf2p complex) MRPL32 = (mitochondrial ribosomal large subunit) RPA12 = (DNA-directed RNA polymerase I complex) RSC2 = (RSC complex) ARP10 = (dynactin complex) ARP5 = (Ino80p complex) RRN11 = (RNA polymerase I transcription factor complex) RPS18A = (cytoplasmic ribosomal small subunit) MCM6 = (Mcm2-7 complex) RPL32 = (cytoplasmic ribosomal large subunit) ROX3 = (Kornberg's mediator (SRB) complex) HAP4 = (CCAAT-binding factor complex) FAA4 = (Fatty Acid Import Complex) BI4 = (Bi4p/Nam2p complex) HOP1 = (Synaptonemal complex (SC)) PRP31 = (U4/U6 x U5 tri-snRNP complex) CET1 = (mRNA guanylyl transferase (capping complex)) CBF1 = (Cbf1p/Met4p/Met28p complex) POP5 = (nucleolar ribonuclease P complex::ribonuclease MRP complex) RPL20B = (cytoplasmic ribosomal large subunit) TPS2 = ("alpha,alpha-trehalose-phosphate synthase complex (UDP-forming)") CCT6 = (chaperonin-containing T-complex) YKU70 = (Ku complex) YMR31 = (mitochondrial ribosomal small subunit) STE5 = (STE5-MAPK complex) RRP46 = (Cytoplasmic exosome complex::Nuclear exosome complex) BUD6 = (polarisome complex) HSK3 = (DASH complex) INO4 = (Ino2p/Ino4p basic helix-loop-helix heteromeric complex) ELA1 = (Cul3p-RING ubiquitin ligase complex::Ela1p/Elc1p complex) LSM8 = (U6 snRNP complex::U4/U6 x U5 tri-snRNP complex) FAR7 = (Far3p/Far7p/Far8p/Far9p/Far10p/Far11p complex) BI3 = (Bi3 ribonucleoprotein complex) GTB1 = (Rot2p/Gtb1p complex) RTG2 = (SLIK (SAGA-like) complex::Mks1p/Rtg2p complex) CLP1 = (mRNA cleavage factor complex (CFI)) RRP42 = (Cytoplasmic exosome complex::Nuclear exosome complex) PPH3 = (histone H2A phosphatase complex) PCI8 = (signalosome complex) SNF2 = (SWI/SNF complex) EST2 = (Telomerase) TUP1 = (Tup1p/Ssn6p complex::Sko1p/Cyc8p/Tup1 repressor complex) PHO85 = (Pho85p/Pcl1p complex::Pho85p/Pcl2p complex::Pho85p/Pcl10p complex::Pho85p/Pcl8p complex::Pho85p/Pho80p complex) COB = ("Cytochrome bc1 complex (Ubiquinol-cytochrome c reductase complex, complex III)") CHD1 = (SAGA complex::SLIK (SAGA-like) complex) SGF73 = (SAGA complex::SLIK (SAGA-like) complex) GCN20 = (Gcn1p/Gcn20p complex) BRN1 = (nuclear condensin complex) TFC4 = (transcription factor TFIIIC complex) MET31 = (Met4p/Met28p/Met31p complex) DEF1 = (Def1p/Rad26p complex) OST5 = (oligosaccharyl transferase complex) CSL4 = (Cytoplasmic exosome complex::Nuclear exosome complex) PRP39 = (U1 snRNP complex::commitment complex) RPS15 = (cytoplasmic ribosomal small subunit) UTP8 = (UTP A complex) RPL36B = (cytoplasmic ribosomal large subunit) RAM1 = (protein farnesyltransferase complex) CUS2 = (U2 snRNP complex) SRP101 = (signal recognition particle receptor complex) PRP18 = (U4/U6 x U5 tri-snRNP complex) PGD1 = (Kornberg's mediator (SRB) complex) RVS161 = (Rvs161p/Rvs167p complex) ATG20 = (Atg20p/Snx4p/Snx41p complex) HAP5 = (CCAAT-binding factor complex) SWM1 = (anaphase-promoting complex) EGD1 = (nascent polypeptide-associated complex) PRP40 = (U1 snRNP complex::commitment complex) MNP1 = (mitochondrial ribosomal large subunit) FAA1 = (Fatty Acid Import Complex) OCA1 = (OCA complex) ARC19 = (Arp2/3 protein complex) ATP1 = (F0/F1 ATP synthase (complex V)) HSH155 = (U2 snRNP complex::SF3b complex) MRPL10 = (mitochondrial ribosomal large subunit) CUL3 = (Cul3p-RING ubiquitin ligase complex) STH1 = (RSC complex) ASK1 = (DASH complex) IES4 = (Ino80p complex) URB1 = (Npa2p-containing subcomplex) RPN11 = (19/22S regulator) RSM25 = (mitochondrial ribosomal small subunit) POP3 = (nucleolar ribonuclease P complex::ribonuclease MRP complex) BNI4 = (Bni4p/Glc7p complex) GSG1 = (TRAPP complex) GID8 = (FBP degradation complex) RSE1 = (U2 snRNP complex::SF3b complex) KGD1 = (mitochondrial oxoglutarate dehydrogenase complex) MRPS9 = (mitochondrial ribosomal small subunit) TFG2 = (transcription factor TFIIF complex) ESP1 = (Esp1p/Pds1p complex) SKO1 = (Sko1p/Cyc8p/Tup1 repressor complex) PHO23 = (Rpd3L complex) MSL1 = (U2 snRNP complex) USA1 = (ubiquitin ligase ERAD-L complex) COQ4 = (Q-biosynthetic Coq polypeptide complex) ELP6 = (Elongator complex) LTV1 = (GSE Complex) RPL42A = (cytoplasmic ribosomal large subunit) MLH3 = (Mlh1p/Mlh3p complex) RPC25 = (DNA-directed RNA polymerase III complex) RPC19 = (DNA-directed RNA polymerase III complex::DNA-directed RNA polymerase I complex) MCD1 = (nuclear cohesin complex) COX6 = (Cytochrome c oxidase (complex IV)) POL2 = (DNA polymerase epsilon complex) STT3 = (oligosaccharyl transferase complex) TAP42 = (Tap42p/Sit4p/Rrd1p complex::Tap42p/Pph21p/Rrd2p complex) HAP2 = (CCAAT-binding factor complex) MED8 = (Kornberg's mediator (SRB) complex) MED1 = (Kornberg's mediator (SRB) complex) RAD14 = (nucleotide-excision repair factor 1 complex) APM4 = (AP-2 adaptor complex) FAR8 = (Far3p/Far7p/Far8p/Far9p/Far10p/Far11p complex) SWC5 = (Swr1p complex) CBK1 = (Mob2p/Cbk1p complex) MSI1 = (chromatin assembly complex) YSF3 = (SF3b complex) PEP8 = (retromer complex) RPB5 = (DNA-directed RNA polymerase III complex::DNA-directed RNA polymerase I complex::DNA-directed RNA polymerase II complex) PSR1 = (Psr1p/Whi2p complex) PRE5 = (20S proteasome) RPL17A = (cytoplasmic ribosomal large subunit) MTO1 = (Mto1p/Mss1p complex) SDH3 = (Succinate dehydrogenase complex (complex II)) PEX12 = (RING finger peroxin complex) ARC40 = (Arp2/3 protein complex) VPS27 = (Hse1p/Vps27p complex) REV7 = (Polzeta-Rev1p complex::zeta DNA polymerase complex) SPO11 = (meiotic recombination initiation complex) CSI1 = (signalosome complex) SSO1 = (SNARE complex) AIR1 = (TRAMP complex (Air1p)) TIM54 = (mitochondrial inner membrane protein insertion complex) SUV3 = (degradosome) RPS23A = (cytoplasmic ribosomal small subunit) NOT5 = (CCR4-NOT core complex) UME6 = (Rpd3L complex::Ume6p/Ime1p complex) HRD3 = (ubiquitin ligase ERAD-L complex::ubiquitin ligase ERAD-M complex::luminal surveillance complex) NUP57 = (Nsp1p complex) SPT7 = (SAGA complex::SLIK (SAGA-like) complex) SRP14 = (Signal recognition particle (SRP)) REV3 = (Polzeta-Rev1p complex::zeta DNA polymerase complex) GET1 = (GET complex) ATP15 = (F0/F1 ATP synthase (complex V)) RPL12B = (cytoplasmic ribosomal large subunit) FAS2 = (fatty acid synthase complex) COG5 = (Golgi transport complex) VID28 = (FBP degradation complex) MAK31 = (NatC complex) SEC15 = (Exocyst complex) ERF2 = (palmitoyltransferase complex) FAS1 = (fatty acid synthase complex) ATP16 = (F0/F1 ATP synthase (complex V)) SLI15 = (Sli15p/Bir1p complex::Aurora B-INCENP protein kinase complex) VPS41 = (HOPS complex) SEC13 = (COPII::Nup84p complex) MED2 = (Kornberg's mediator (SRB) complex) RPS18B = (cytoplasmic ribosomal small subunit) PMT5 = (Protein O-mannosyltransferase(Pmt3p/Pmt5p)) HCR1 = (eIF3) PAN1 = ("actin cytoskeleton-regulatory complex, Pan1p/Sla1p/End3p complex") SDH1 = (Succinate dehydrogenase complex (complex II)) RFC5 = (DNA replication factor C complex (Ctf18p/Ctf8p/dcc1p)::DNA replication factor C complex (Rad24p)::DNA replication factor C complex (Elg1p)::DNA replication factor C complex (Rcf1p)) MRP10 = (mitochondrial ribosomal small subunit) GID7 = (FBP degradation complex) SEC28 = (COPI) YKE2 = (prefoldin complex) IST3 = (U2 snRNP complex::RES complex) MTR2 = (Mtr2p/Mex67p complex) TAF1 = (transcription factor TFIID complex) SMC4 = (nuclear condensin complex) SNC1 = (SNARE complex) PEX13 = (peroxin docking complex) ASH1 = (Rpd3L complex) COX5A = (Cytochrome c oxidase (complex IV)) SYF1 = (Prp19-associated complex) KAE1 = (EKC/KEOPS protein complex) SLD2 = (Dpb11p/Sld2p complex) BIT61 = (TORC 2 complex) SPC19 = (DASH complex) MEX67 = (Mtr2p/Mex67p complex) RAV2 = (RAVE complex) VPS33 = (CORVET complex::HOPS complex) VPS34 = (phosphatidylinositol (PtdIns) 3-kinase complex (functions in CPY sorting)::phosphatidylinositol (PtdIns) 3-kinase complex (functions in autophagy)) PMT1 = (Protein O-mannosyltransferase(Pmt1p/Pmt2p)) RPT5 = (19/22S regulator) DOP1 = (Dop1p/Mon2p complex) MSS51 = (Cox14p/Cox1p/Mss51p complex) RPL21A = (cytoplasmic ribosomal large subunit) PRI1 = (alpha DNA polymerase:primase complex) SPC34 = (DASH complex) RTT102 = (SWI/SNF complex::RSC complex) NHP10 = (Ino80p complex) RPN6 = (19/22S regulator) SGT1 = (SCF-CDC4 complex) SNF6 = (SWI/SNF complex) SPP381 = (U4/U6 x U5 tri-snRNP complex) COX8 = (Cytochrome c oxidase (complex IV)) PXA2 = (Pxa1p/Pxa2p complex) GAA1 = (GPI-anchor transamidase complex) RPN2 = (19/22S regulator) SSS1 = (Ssh1p translocon complex::Sec61p translocon complex) TFB5 = (transcription factor TFIIH complex) OCA2 = (OCA complex) RTC6 = (mitochondrial ribosomal large subunit) SNU23 = (U4/U6 x U5 tri-snRNP complex) SPT4 = (DSIF complex) RPL34B = (cytoplasmic ribosomal large subunit) RVB1 = (Ino80p complex::Swr1p complex) RPT1 = (19/22S regulator) RNH203 = (ribonuclease H2 complex) YTH1 = (mRNA cleavage and polyadenylation specificity factor complex) ARG5,6 = ("Arg2p/Arg5,6p complex") RSP5 = (Rsp5p/Bul2 ubiquitin ligase complex::Rsp5p/Bul1 ubiquitin ligase complex) COG8 = (Golgi transport complex) HHF1 = (Nucleosomal protein complex::RNA polymerase I upstream activating factor complex) PET123 = (mitochondrial ribosomal small subunit) TRX1 = (LMA1 complex) OST4 = (oligosaccharyl transferase complex) MED7 = (Kornberg's mediator (SRB) complex) BUG1 = (Grh1p/Bug1p complex) EAF1 = (NuA4 histone acetyltransferase complex) PUP1 = (20S proteasome) RPS11B = (cytoplasmic ribosomal small subunit) TRA1 = (NuA4 histone acetyltransferase complex::SAGA complex::SLIK (SAGA-like) complex) MRPS35 = (mitochondrial ribosomal small subunit) SIK1 = (box C/D snoRNP complex) COG4 = (Golgi transport complex) SPC25 = (Ndc80p complex) ARP6 = (Swr1p complex) TAF12 = (SAGA complex::SLIK (SAGA-like) complex::transcription factor TFIID complex) RRP43 = (Cytoplasmic exosome complex::Nuclear exosome complex) RPL6A = (cytoplasmic ribosomal large subunit) RRN6 = (RNA polymerase I transcription factor complex) RPO31 = (DNA-directed RNA polymerase III complex) KRE11 = (TRAPP complex) SNT1 = (Set3p complex) DCP2 = (Decapping Enzyme Complex) OCA5 = (OCA complex) SME1 = (U2 snRNP complex::U5 snRNP complex::U1 snRNP complex::commitment complex::U4/U6 x U5 tri-snRNP complex) MLH1 = (Mlh1p/Mlh2p complex::Mlh1p/Mlh3p complex::Mlh1p/Pms1p complex) HRT1 = (nuclear ubiquitin ligase complex) CEP3 = (CBF3 complex) TRS33 = (TRAPP complex) CLC1 = (Clathrin) MEI5 = (Mei5p/Sae3p complex) ERI1 = (glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex) KGD2 = (mitochondrial oxoglutarate dehydrogenase complex) CDC36 = (CCR4-NOT core complex) RPT2 = (19/22S regulator) RSC30 = (RSC complex) PRE2 = (20S proteasome) VPS28 = (ESCRT I complex) TAF5 = (SAGA complex::SLIK (SAGA-like) complex::transcription factor TFIID complex) AFG3 = (m-AAA complex) RPL11A = (cytoplasmic ribosomal large subunit) CDC33 = (eIF4F) AOS1 = (Uba2p/Aos1p complex) SLX4 = (Slx1p/Slx4p complex) CEG1 = (mRNA guanylyl transferase (capping complex)) SNT309 = (Prp19-associated complex) MRPL3 = (mitochondrial ribosomal large subunit) VPS30 = (phosphatidylinositol (PtdIns) 3-kinase complex (functions in CPY sorting)::phosphatidylinositol (PtdIns) 3-kinase complex (functions in autophagy)) SIT4 = (Tap42p/Sit4p/Rrd1p complex::Sap185p/Sit4p complex::Sap190p/Sit4p complex::Sap155p/Sit4p complex) SEC23 = (Sfb3p/Sec23p complex::COPII) RCO1 = (Rpd3S complex) MRPL51 = (mitochondrial ribosomal large subunit) VTC4 = (VTC heterotetrameric complex) SMX2 = (U2 snRNP complex::U5 snRNP complex::U1 snRNP complex::commitment complex::U4/U6 x U5 tri-snRNP complex) BET5 = (TRAPP complex) POP8 = (nucleolar ribonuclease P complex::ribonuclease MRP complex) MTR4 = (TRAMP complex (Air1p)::TRAMP complex (Air2p)) BUD14 = (Bud14p/Glc7p complex) MED6 = (Kornberg's mediator (SRB) complex) TIM50 = (mitochondrial inner membrane presequence translocase complex) TIF4631 = (eIF4F) QCR7 = ("Cytochrome bc1 complex (Ubiquinol-cytochrome c reductase complex, complex III)") TIM9 = (mitochondrial intermembrane space protein transporter complex) TRP3 = (anthranilate synthase complex) SFB3 = (Sfb3p/Sec23p complex) MSS1 = (Mto1p/Mss1p complex) FUS3 = (STE5-MAPK complex) APC11 = (anaphase-promoting complex) TFB2 = (nucleotide-excision repair factor 3 complex::transcription factor TFIIH complex) RPC17 = (DNA-directed RNA polymerase III complex) SMX3 = (U2 snRNP complex::U5 snRNP complex::U1 snRNP complex::commitment complex::U4/U6 x U5 tri-snRNP complex) MOT2 = (CCR4-NOT core complex) GTR2 = (GSE Complex::EGO complex) VPS20 = (ESCRT III complex) TFC7 = (transcription factor TFIIIC complex) VPS29 = (retromer complex) RIC1 = (guanyl-nucleotide exchange factor complex) RPL33B = (cytoplasmic ribosomal large subunit) QCR8 = ("Cytochrome bc1 complex (Ubiquinol-cytochrome c reductase complex, complex III)") SPC29 = (SPB components) MAD3 = (mitotic checkpoint complex) RPB9 = (DNA-directed RNA polymerase II complex) RPP0 = (cytoplasmic ribosomal large subunit) ARD1 = (NatA complex) CNM67 = (SPB components) CCT3 = (chaperonin-containing T-complex) NTO1 = (NuA3 histone acetyltransferase complex) WBP1 = (oligosaccharyl transferase complex) TRM112 = (adoMet-dependent tRNA methyltransferase (Mtase) Complex) IOC3 = (ISW1a complex) TFB1 = (nucleotide-excision repair factor 3 complex::transcription factor TFIIH complex) TFC6 = (transcription factor TFIIIC complex) RPS2 = (cytoplasmic ribosomal small subunit) PRP11 = (U2 snRNP complex::Prp9p/Prp11p/Prp21p complex(SF3a complex)) FAT1 = (Fatty Acid Import Complex) MON1 = (Mon1p/Ccz1p complex) RPB2 = (DNA-directed RNA polymerase II complex) SRO7 = (Sro1p/Sec4p/Sec9p complex) SRB4 = (Kornberg's mediator (SRB) complex) NAN1 = (UTP A complex) MRPL37 = (mitochondrial ribosomal large subunit) RPL27A = (cytoplasmic ribosomal large subunit) RSM10 = (mitochondrial ribosomal small subunit) RPS26A = (cytoplasmic ribosomal small subunit) PCL2 = (Pho85p/Pcl2p complex) EGD2 = (nascent polypeptide-associated complex) MRPL23 = (mitochondrial ribosomal large subunit) RRP7 = (UTP C complex::CURI complex) AVO2 = (TORC 2 complex) TFA1 = (transcription factor TFIIE complex) DAD3 = (DASH complex) RPL15B = (cytoplasmic ribosomal large subunit) GAB1 = (GPI-anchor transamidase complex) RPN3 = (19/22S regulator) SUM1 = (Sum1p/Rfm1p/Hst1p complex) RTS1 = (protein phosphatase type 2A complex (Rts1p)) GIM4 = (prefoldin complex) RPS21B = (cytoplasmic ribosomal small subunit) MET32 = (Met4p/Met28p/Met32p complex) ARP7 = (SWI/SNF complex::RSC complex) REC104 = (meiotic recombination initiation complex) SOH1 = (Kornberg's mediator (SRB) complex) NAT1 = (NatA complex) CHS6 = (Chs5p/Arf-1binding proteins (ChAPs)) RPL26A = (cytoplasmic ribosomal large subunit) RAD24 = (DNA replication factor C complex (Rad24p)) GIP1 = (Gip1p/Glc7p complex) KEL1 = (Kel1p/Kel2p complex::Kel1p/Kel2p/Lte1p complex) COX4 = (Cytochrome c oxidase (complex IV)) MLH2 = (Mlh1p/Mlh2p complex) BTT1 = (nascent polypeptide-associated complex) TOA1 = (transcription factor TFIIA complex) TAF14 = (Ino80p complex::transcription factor TFIIF complex::NuA3 histone acetyltransferase complex::SWI/SNF complex::transcription factor TFIID complex) RIX1 = (Rix1p complex) VMA13 = ("H+-transporting ATPase, vacuolar"::"H+-transporting ATPase, Golgi") SAP185 = (Sap185p/Sit4p complex) MPS2 = (Mps2p/Bbp1p complex) GLC7 = (Reg1p/Glc7p complex::Bni4p/Glc7p complex::Bud14p/Glc7p complex::Gac1p/Glc7p complex::mRNA cleavage and polyadenylation specificity factor complex::Reg2p/Glc7p complex::Sds22p/Glc7p complex::Gip1p/Glc7p complex) RPO26 = (DNA-directed RNA polymerase III complex::DNA-directed RNA polymerase I complex::DNA-directed RNA polymerase II complex) NBP1 = (Mps2p/Bbp1p complex) CDC73 = (Cdc73p/Paf1p complex) UBP6 = (19/22S regulator) RMD5 = (FBP degradation complex) SAE3 = (Mei5p/Sae3p complex) UTP9 = (UTP A complex) RAD3 = (nucleotide-excision repair factor 3 complex::transcription factor TFIIH complex) RRN5 = (RNA polymerase I upstream activating factor complex) XRS2 = (MRX complex) ORC6 = (Origin recognition complex) FKS1 = ("1,3-beta-glucan synthase complex (Fks1p/Rho1p)") SIR2 = (RENT complex::chromatin silencing complex) LIN1 = (U5 snRNP complex) BRR2 = (U5 snRNP complex::U4/U6 x U5 tri-snRNP complex) RPS7A = (cytoplasmic ribosomal small subunit) COX12 = (Cytochrome c oxidase (complex IV)) MGE1 = (PAM complex) TPK1 = (cAMP-dependent protein kinase) RPC11 = (DNA-directed RNA polymerase III complex) SEC31 = (COPII) MRPL9 = (mitochondrial ribosomal large subunit) RPS14A = (cytoplasmic ribosomal small subunit) RPS10B = (cytoplasmic ribosomal small subunit) NVJ1 = (Swh1p/Nvj1p complex) MRPL49 = (mitochondrial ribosomal large subunit) SWP82 = (SWI/SNF complex) VPS36 = (ESCRT II complex) SKI3 = (Ski Complex) RPS26B = (cytoplasmic ribosomal small subunit) SDS3 = (Rpd3L complex) SET1 = (COMPASS complex) MND1 = (Hop2p/Mnd1p complex) SRO9 = (HMC Complex) RPD3 = (Rpd3L complex::Rpd3S complex) PEP5 = (CORVET complex::HOPS complex) SUI3 = (multi-eIF complex::eIF2) MRP7 = (mitochondrial ribosomal large subunit) CAC2 = (chromatin assembly complex) HYM1 = (Hym1p/Kic1p/Sog2p complex) NOC4 = (Noc4p/Nop14p complex) CDC16 = (anaphase-promoting complex) DOC1 = (anaphase-promoting complex) RPA43 = (DNA-directed RNA polymerase I complex) LST8 = (TORC 2 complex::TORC 1 complex) SAS2 = (SAS Complex) HIR3 = (HIR complex) RAD26 = (Def1p/Rad26p complex) PMT2 = (Protein O-mannosyltransferase(Pmt1p/Pmt2p)) SBH1 = (Sec61p translocon complex) IMG2 = (mitochondrial ribosomal large subunit) RPS29A = (cytoplasmic ribosomal small subunit) CKB1 = (UTP C complex::protein kinase CK2 complex) RPL16A = (cytoplasmic ribosomal large subunit) RPL7A = (cytoplasmic ribosomal large subunit) RAV1 = (RAVE complex) CBP1 = (Cbp1p/Pet309p complex) MCM21 = (COMA complex) RSM23 = (mitochondrial ribosomal small subunit) RAD1 = (nucleotide-excision repair factor 1 complex) SNU71 = (U1 snRNP complex::commitment complex) LTE1 = (Kel1p/Kel2p/Lte1p complex) GCD6 = (eIF2B) TSL1 = ("alpha,alpha-trehalose-phosphate synthase complex (UDP-forming)") BUL1 = (Rsp5p/Bul1 ubiquitin ligase complex) ARF1 = (Chs5p/Arf-1binding proteins (ChAPs)) BCH2 = (Chs5p/Arf-1binding proteins (ChAPs)) RMP1 = (ribonuclease MRP complex) TOR2 = (TORC 2 complex) SLM2 = (TORC 2 complex) MRPL28 = (mitochondrial ribosomal large subunit) SNP1 = (U1 snRNP complex::commitment complex) HOC1 = ("alpha-1,6-mannosyltransferase complex(Anp1p/Mnn9p)") RPL35A = (cytoplasmic ribosomal large subunit) RPA190 = (DNA-directed RNA polymerase I complex) SAP190 = (Sap190p/Sit4p complex) SMD3 = (U2 snRNP complex::U5 snRNP complex::U1 snRNP complex::commitment complex::U4/U6 x U5 tri-snRNP complex) VAC14 = (Fig4p/Vac14p complex) SET3 = (Set3p complex) RPC34 = (DNA-directed RNA polymerase III complex) SSU72 = (mRNA cleavage and polyadenylation specificity factor complex) RMI1 = (RecQ helicase-Topo III complex) DAM1 = (DASH complex) TOM40 = (mitochondrial outer membrane translocase complex) PRP21 = (U2 snRNP complex::Prp9p/Prp11p/Prp21p complex(SF3a complex)) RSC1 = (RSC complex) ISW2 = (chromatin accessibility complex) NSL1 = (MIND complex) CGI121 = (EKC/KEOPS protein complex) RPS4A = (cytoplasmic ribosomal small subunit) CDC48 = (Cdc48p complex) BCH1 = (Chs5p/Arf-1binding proteins (ChAPs)) PFK2 = (6-phosphofructokinase complex) MRS5 = (mitochondrial inner membrane protein insertion complex) SEC65 = (Signal recognition particle (SRP)) TFP3 = ("H+-transporting ATPase, vacuolar"::"H+-transporting ATPase, Golgi") RPL43B = (cytoplasmic ribosomal large subunit) TFB3 = (transcription factor TFIIH complex) CPA1 = (carbamoyl-phosphate synthase complex) POP1 = (nucleolar ribonuclease P complex::ribonuclease MRP complex) REF2 = (mRNA cleavage and polyadenylation specificity factor complex) RPL2B = (cytoplasmic ribosomal large subunit) PEP3 = (CORVET complex::HOPS complex) TAF9 = (SAGA complex::SLIK (SAGA-like) complex::transcription factor TFIID complex) STO1 = (commitment complex) TOF1 = (Tof1p/Mrc1p/Csm3p complex) RVB2 = (Ino80p complex::Swr1p complex) GAL11 = (Kornberg's mediator (SRB) complex) FET5 = (Fth1p/Fet5p complex) REV1 = (Polzeta-Rev1p complex) GCD1 = (eIF2B) PAN3 = (PAN complex) RPN8 = (19/22S regulator) PDA1 = (mitochondrial pyruvate dehydrogenase complex)